PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008736.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 212aa MW: 24368.7 Da PI: 10.3459

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008736.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.1	6.9e-19	73	177	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekd 73 Y++YAke GF+vrk +k+ ++++ + f+C ++g++ k k ++ +rr++a+ r+gC+a+l++kk+ d Cse_sc008736.1_g070.1 73 AYQDYAKEGGFEVRKGGQKNYNKKEDPSLKYFYCVRQGFKPVPKPKnsiadksqttnslgvnKVIKRRKHASCRCGCTAQLRLKKRPD 160 59************99999899999********9877666699*******9999999***************** PP FAR1 74 gkwevtkleleHnHela 90 k+ vtk+ ++HnH+l+ Cse_sc008736.1_g070.1 161 VKYFVTKFFEKHNHSLV 177 ************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MAEHQHHVEG EPVTPRAVHN EQSTPGEGYF TPPEHQDGSF QPTPNGTRFW VPKVTTKPKE 60 GMVFDTLDIA LKAYQDYAKE GGFEVRKGGQ KNYNKKEDPS LKYFYCVRQG FKPVPKPKNS 120 IADKSQTTNS LGVNKVIKRR KHASCRCGCT AQLRLKKRPD VKYFVTKFFE KHNHSLVYQD 180 DIKYLRTNRR LTFTKQQILN QLSNANIGPI RS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-12	FAR1 family protein