PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008739.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 205aa MW: 23128 Da PI: 9.593

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008739.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.1	6.7e-32	28	85	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgy+WrKYGqK++k+s +prsYY+Ct ++C +kk+vers++dp++++itYeg H h Cse_sc008739.1_g040.1 28 DDGYKWRKYGQKSIKNSSNPRSYYKCTNPHCGAKKQVERSNDDPDTLIITYEGLHLHY 85 8******************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MDRGVSGGRV ENSKYILKMK SSSNVMADDG YKWRKYGQKS IKNSSNPRSY YKCTNPHCGA 60 KKQVERSNDD PDTLIITYEG LHLHYMYPFF MFGQSENPDP PTKKFRRFNF GLGAHQRTNK 120 DTEESIRHVC LDQQPSTMLI KDINPPKVAI SSQGLLEDMV PLLIRNPVIY TTNSSKSSSS 180 SSSSSSSSSH TTPPDSPLFS WTPIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	2e-40	WRKY family protein