PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008803.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 407aa MW: 44757.5 Da PI: 8.205

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008803.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.2	8.4e-39	101	161	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+++cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rn PvG+grrknk+ss Cse_sc008803.1_g020.1 101 PDKIIPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNTPVGSGRRKNKSSS 161 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MSDPAIKLFG KTIQLLHLDR QQQCCDKEFK GTLEEEHVTS QTEDTCSRPS IDELINQPTS 60 SGINDDDPKT PTTEKETSSK NTTKKENPID NSNSEEKPPK PDKIIPCPRC NSMDTKFCYY 120 NNYNVNQPRH FCKNCQRYWT AGGTMRNTPV GSGRRKNKSS SSASYYRHLI VSEALHPSLK 180 NNGSVLNFGS DVPLCESMNS ALNFSDKSQK SEDDHSSSAS NSVGKKGING LNNFQGYPIQ 240 IPCFPHPAPP WPYVGHSGIP VHFYPTPQYW GSTVQVPPSP WSVQYIAPNS PLGKHSRDGN 300 LLSPSSSSRN EVSSKDKNSE SSVLIPKTLR INDPNEAAKS SLWSTLGISK EGHGNNTSSI 360 NGGNLCKASQ SKSDEKNVVD VTSLVNLQAN PAALSRSLNF RETVYNS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MSDPAIKLFG KTIQLLHLDR QQQCCDKEFK GTLEEEHVTS QTEDTCSRPS IDELINQPTS  60
SGINDDDPKT PTTEKETSSK NTTKKENPID NSNSEEKPPK PDKIIPCPRC NSMDTKFCYY  120
NNYNVNQPRH FCKNCQRYWT AGGTMRNTPV GSGRRKNKSS SSASYYRHLI VSEALHPSLK  180
NNGSVLNFGS DVPLCESMNS ALNFSDKSQK SEDDHSSSAS NSVGKKGING LNNFQGYPIQ  240
IPCFPHPAPP WPYVGHSGIP VHFYPTPQYW GSTVQVPPSP WSVQYIAPNS PLGKHSRDGN  300
LLSPSSSSRN EVSSKDKNSE SSVLIPKTLR INDPNEAAKS SLWSTLGISK EGHGNNTSSI  360
NGGNLCKASQ SKSDEKNVVD VTSLVNLQAN PAALSRSLNF RETVYNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-58	Dof family protein