PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008815.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 124aa    MW: 14532.2 Da    PI: 9.993
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008815.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.3e-08711051655
                            HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            iN+++  L+  +P++      K +Ka++L +A+eY+k+ q
  Cse_sc008815.1_g010.1  71 INEKLKALQVSVPNS-----NKTDKASMLDEAIEYLKQFQ 105
                            899999999999986.....6****************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MSILQRRSWM QYKLPELEGF DDFVDILGSQ IWVIILAFWF LDCVKGYWLP FTIRCRMMAM  60
VKKRRGIIGG INEKLKALQV SVPNSNKTDK ASMLDEAIEY LKQFQPKVRG EYMNNAGVRF  120
SRNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-16bHLH family protein