PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008870.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 151aa    MW: 17880.4 Da    PI: 10.1326
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008870.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B368.68.7e-2228111999
                            HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                     B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                            d ++++  ++p +f++++++k   +kt++l+d+sgr+W v    +k+ +++++++GW++Fv++n L+ g f+vF++++ ++++++v++
  Cse_sc008870.1_g070.1  28 DRTSHQ--MIPPEFLKHFEQK--IPKTIILKDLSGRVWHVDT--KKRNNGVFMENGWNRFVNDNTLELGQFMVFRYSK-QSTTFTVRI 108
                            444444..99*****777655..889****************..999999**************************98.555569999 PP

                            E-S CS
                     B3  97 frk 99 
                            f +
  Cse_sc008870.1_g070.1 109 FGR 111
                            976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MIKRGRDRPQ EVPVINQDPE FFDIFLPDRT SHQMIPPEFL KHFEQKIPKT IILKDLSGRV  60
WHVDTKKRNN GVFMENGWNR FVNDNTLELG QFMVFRYSKQ STTFTVRIFG RDACKSEDQA  120
SEKPLIRVKD EEESDQHSTP IHQPKRKRGK P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144151PKRKRGKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-23B3 family protein