PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008870.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 259aa    MW: 30254.7 Da    PI: 9.7563
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008870.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.49.4e-17191031299
                            HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                     B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                            +++ l +pkkf++eh  k   + +++l  ++ + W++ + +  ++g ++l++GW eF++  +Lk gD +vF++ g+s f  +v++f++
  Cse_sc008870.1_g080.1  19 SKKSLKIPKKFTKEHRRKILLNNDVVLIVSDDKAWSLGC-MVSCDGNIWLQNGWPEFAQHYRLKIGDLLVFEHLGKSLF--HVRIFKE 103
                            56679**********88888999****************.5666666*************************9998888..9999986 PP
2B336.96.7e-12163251597
                            -..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EE.EEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3   5 ltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsW.evkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                            ++ +++++s  l +p  f++++  ++     + +le ++gr+W  +k++  k s r + +++Wk+F ++n+L + D++vF++++++e+
  Cse_sc008870.1_g080.1 163 MK-ASYTRSYGLNIPLWFMRRYlTSN----EDCVLELSNGRKWgPIKCKGYKISAR-MYGDNWKKFHDENHLVVDDVCVFEMTSETEK 244
                            44.44555555***********5333....36899********5577744555544.6699********************9998888 PP

                            ..EEEEE CS
                     B3  91 elvvkvf 97 
                             l+v++f
  Cse_sc008870.1_g080.1 245 VLKVTIF 251
                            8999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MPTMRPQRKS RKFWMSITSK KSLKIPKKFT KEHRRKILLN NDVVLIVSDD KAWSLGCMVS  60
CDGNIWLQNG WPEFAQHYRL KIGDLLVFEH LGKSLFHVRI FKENDPSFAQ DDHAVSPHTF  120
QETKGKTDLS SENRDKYRST NYKALEAAKA FMADNPNSYI REMKASYTRS YGLNIPLWFM  180
RRYLTSNEDC VLELSNGRKW GPIKCKGYKI SARMYGDNWK KFHDENHLVV DDVCVFEMTS  240
ETEKVLKVTI FHACGNYSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-13B3 family protein