PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc008911.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 245aa    MW: 28017.5 Da    PI: 10.0798
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc008911.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind118.15.1e-37291212103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl k+y++++d+++++++sws+ +n+fvv+d+ efak++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g
  Cse_sc008911.1_g010.1  29 FLVKTYDMVDDPSTDKVVSWSAANNTFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRG 107
                            9********************999*****************************************999.........*********** PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            +k+ll++i r+ks+
  Cse_sc008911.1_g010.1 108 QKHLLKTIVRRKSA 121
                            ***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEPRSSSSSN DGAAIPPPPP PAANAPPPFL VKTYDMVDDP STDKVVSWSA ANNTFVVWDP  60
PEFAKDLLPK YFKHNNFSSF VRQLNTYGFR KVDPDRWEFA NEGFLRGQKH LLKTIVRRKS  120
ASGHTQPQQP PHQQTSSMGA CVEVGKFGLE EEVERLKRDK NVLMQELVRL RQQQQTTDNQ  180
MQSMVKRLQG MEQRQQQMMS FLAKAVNSPG FLAHFVQQQN ESTRLITEGN KXQGYYLHLL  240
RQIPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02990.17e-98HSF family protein