PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc008984.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HB-other

Protein Properties

Length: 376aa MW: 42986 Da PI: 4.4493

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc008984.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.4	2e-07	294	340	6	52
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++k +e+Le+++++++ p+ +++ + + ++++ ++V WF +R Cse_sc008984.1_g040.1 294 RLKKVHVETLERVYRRSKRPTNAMISNIVHVTKIPRKKVLKWFEDKR 340 5677889************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MAAASLVQTI RLYTFPFVSS SSSSRCSSSS VVTFARRRKS PSSIISSKNK KQGLRRNIGG 60 KEGDIEEDAF EALFKQLEED LKNDGLSFDD DDDEITEEDL IKLERELEEA LADDDLLALF 120 DDDTTDEIIE MEVKDKKAVN KKGTTVNQVI EKEIPIINQE EEEEDESEYE EEEEEEDEDE 180 DEDEDEGPLE LKRWQLRRLA YALKDGRRKT SIKNLAADLC LDRAIVLELL RDPPPDLLML 240 SASLPDKPDS TILKPVIKPE DAALLASERD ALKATATKKV PVHEMQSNWS AKKRLKKVHV 300 ETLERVYRRS KRPTNAMISN IVHVTKIPRK KVLKWFEDKR GEDGVPDQRQ PYQRNTETLQ 360 ESENSHGDTT EVEKLI

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MAAASLVQTI RLYTFPFVSS SSSSRCSSSS VVTFARRRKS PSSIISSKNK KQGLRRNIGG  60
KEGDIEEDAF EALFKQLEED LKNDGLSFDD DDDEITEEDL IKLERELEEA LADDDLLALF  120
DDDTTDEIIE MEVKDKKAVN KKGTTVNQVI EKEIPIINQE EEEEDESEYE EEEEEEDEDE  180
DEDEDEGPLE LKRWQLRRLA YALKDGRRKT SIKNLAADLC LDRAIVLELL RDPPPDLLML  240
SASLPDKPDS TILKPVIKPE DAALLASERD ALKATATKKV PVHEMQSNWS AKKRLKKVHV  300
ETLERVYRRS KRPTNAMISN IVHVTKIPRK KVLKWFEDKR GEDGVPDQRQ PYQRNTETLQ  360
ESENSHGDTT EVEKLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	334	KRLKKVHVETLERVYRRSKRPTNAMISNIVHVTKIPRKKVLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11270.1	8e-57	HB-other family protein