PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009009.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 215aa    MW: 23770.2 Da    PI: 4.6123
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009009.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.7e-1661111155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + y+GVr +  +g+Wv+e+r+p     +  r++lg++  ae+Aa+a++ a+++++g
  Cse_sc009009.1_g040.1  61 PVYRGVRSRD-KGKWVCEVRHPI----TqSRVWLGTHPNAEMAARAHDVAALAFRG 111
                            68****9888.7*********72....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MDKNASNGSY NSFPSSSSNE TPLTCTDGNG SFSSEQEALM LASENPKKRA GRKKFKETRH  60
PVYRGVRSRD KGKWVCEVRH PITQSRVWLG THPNAEMAAR AHDVAALAFR GRNACLNFAD  120
SVWRLPVPES NDIADIQKAA AEAAEAFRHT QEDAVGETEE NESSPEATDY MNEDELPGFL  180
DSMAEALMLP PPQSVGYGNF FDDVESCADM SLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-59ERF family protein