PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009045.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family BBR-BPC
Protein Properties Length: 290aa    MW: 32235.5 Da    PI: 10.0244
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009045.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind311.82.4e-9512901301
              GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssia.erdaki....rernlalsekkaavaerd...........maflqrdkalaernk 72 
                            mdddg   rn+gyyep    ke+lglqlms +   rd+k+    re+ l l ++++a++++            m++ +rd +++    
  Cse_sc009045.1_g010.1   1 MDDDGL--RNWGYYEPF---KEHLGLQLMSPMGdHRDTKQyfssRENPL-LLNPNGATYHHPhtrmvseptghMNY-MRDGWIQR--- 78 
                            999999..9*****997...9***********9789***9999777777.8899999888888999**********.9*****99... PP

              GAGA_bind  73 alverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkp 159
                                  +++ ++++ +         ++++l +t+s ++++ +   +++++ v  + ee++       ++ +  +  ++ kkr +++ p
  Cse_sc009045.1_g010.1  79 ------ERFHHMQPGNP--------SYSALTNTTSSHNMHLVPALDMSKDHVMsMLEEDNAVGDD--SSGNGDEGGSSIKKRGSTSAP 150
                            ......56777777333........3555666666666666555555555444244444333333..22333334455666788999* PP

              GAGA_bind 160 kekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvs 247
                            k++++k++kk s ++k + k+++  +r+k+ kk++d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+s
  Cse_sc009045.1_g010.1 151 KTPRTKRPKKGSLTPKVNGKPPG--HRAKTVKKNVDMVINGIDMDISGIPIPVCSCTGSPQQCYRWGAGGWQSACCTTTISMYPLPMS 236
                            **********9999999999999..79************************************************************* PP

              GAGA_bind 248 tkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                            tkrrgaRiagrKmSqgafkk+LekLa+eG +++n++DL+++WAkHGtnkfvtir
  Cse_sc009045.1_g010.1 237 TKRRGARIAGRKMSQGAFKKVLEKLASEGNNFANAIDLRSYWAKHGTNKFVTIR 290
                            *****************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDDDGLRNWG YYEPFKEHLG LQLMSPMGDH RDTKQYFSSR ENPLLLNPNG ATYHHPHTRM  60
VSEPTGHMNY MRDGWIQRER FHHMQPGNPS YSALTNTTSS HNMHLVPALD MSKDHVMSML  120
EEDNAVGDDS SGNGDEGGSS IKKRGSTSAP KTPRTKRPKK GSLTPKVNGK PPGHRAKTVK  180
KNVDMVINGI DMDISGIPIP VCSCTGSPQQ CYRWGAGGWQ SACCTTTISM YPLPMSTKRR  240
GARIAGRKMS QGAFKKVLEK LASEGNNFAN AIDLRSYWAK HGTNKFVTIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.18e-91BBR-BPC family protein