PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009055.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 213aa    MW: 23575.6 Da    PI: 9.5729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009055.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-1972122256
                    AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                             y+GVr ++ +gr+ AeIrd          r++lg+f+taeeAa+a++ a+++l+g+
  Cse_sc009055.1_g030.1  72 SYRGVRKRP-WGRFSAEIRDrI-----GqCRHWLGTFDTAEEAARAYDSAARRLHGA 122
                            69*******.**********32.....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MNIYIHKPYF QDLPNSSPAT LDGIAAVVGE HVLYPNPTAC TTLTLTPTNT PSKTHTTCTK  60
PQAPKPLTTE KSYRGVRKRP WGRFSAEIRD RIGQCRHWLG TFDTAEEAAR AYDSAARRLH  120
GAKAKTNFEI PSMFPPSQPP PSSTLAAQNK RKCGPSKCHA VTSVDQLFSS SCYMKMNQET  180
GNDKNKDDNE KVDLELDLNL GGGFNKKART TYV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.17e-20ERF family protein