PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009081.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 747aa    MW: 86927.3 Da    PI: 4.3795
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009081.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.92.1e-32261511127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            lp G+rF Ptd+e++v+yLk+k+e+ k ++e  + ev+ y+++P++L + +   ek+wyf ++r + +++g+r+nr+t+  gyWk+t 
  Cse_sc009081.1_g050.1  26 LPLGYRFCPTDSEIIVNYLKPKIETGKKHTEWRLYEVNFYDFHPEQLAELYWPFEKKWYFLTPRTRMTPNGDRPNRVTRdFGYWKTTR 113
                            699************************999677**************855455689********************88757******* PP

                    NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                            kd +v++  +g +vg k++Lv+y+  a++ +k++W+mhey+
  Cse_sc009081.1_g050.1 114 KDSTVCDDaSGLEVGKKRSLVYYD--ASN-KKSQWLMHEYT 151
                            ******9867778**********3..333.68********7 PP
2NAM88.41.3e-272643881126
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatg 87 
                            l pG+rF Pt +e++v+yL++k+e+ + + +     +d y   P +L +++++ e++wyf ++rd+ky++g+r+nr + + g+W+a+ 
  Cse_sc009081.1_g050.1 264 LIPGYRFCPTHSEIIVYYLQPKIETGEQHPKCRYYIADFYGDTPDNLAANHRHCENKWYFLTSRDRKYPNGNRPNRiIKNFGFWRAST 351
                            579*********************99976644477779*********987788899********************66679******* PP

                    NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmhey 126
                            kdk +++  +ge vg  ++L++y  ++ kg kt W+mhey
  Cse_sc009081.1_g050.1 352 KDKVICDDvTGEIVGRMRSLAYY--DNYKG-KTPWLMHEY 388
                            ******9889999**********..45554.8******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MARNQNLLSL SYNNEEEVEP DYLSTLPLGY RFCPTDSEII VNYLKPKIET GKKHTEWRLY  60
EVNFYDFHPE QLAELYWPFE KKWYFLTPRT RMTPNGDRPN RVTRDFGYWK TTRKDSTVCD  120
DASGLEVGKK RSLVYYDASN KKSQWLMHEY TTINPNIPVG SIEDKMKLTH WVLCEIYKKE  180
KLDGSEQHVL SASNQHLDEL SRRQRISMHH QGSSYQVSTS THVFQQEVQS TYQDNQFVES  240
NEDNFGFTEE EAFEILNDDY ADSLIPGYRF CPTHSEIIVY YLQPKIETGE QHPKCRYYIA  300
DFYGDTPDNL AANHRHCENK WYFLTSRDRK YPNGNRPNRI IKNFGFWRAS TKDKVICDDV  360
TGEIVGRMRS LAYYDNYKGK TPWLMHEYIN NNPNIPVGSR IDEMMKLNDW VLAKIYKKDD  420
NQNGNNNGTD QVENMMNLEE LMEDQNQLQD EPLPRRRRLS MDQESNQTNG AQNIQIQESN  480
HFSGADPSMV APVQFMCDSD QQLAIQPMDT LSGSNLIQPT FQDPSQGIVT EQVQPSYGSL  540
SCEYHHNQTM STSTNNFRFS SDASCSCSTV TNSMASTNVL QQTYNSYQDT EQPQSTLQSF  600
RDQPMEWTED DLKEILENLD EDNTSFQSST NVLQQAYNSH QDTEQPHATL QSFPDQPMEW  660
TEDDLNTEIF ENLDEDNLSS QSSIDVLQQA CNSYQDTEQH RATLQSFPDQ PMEWTEDDLN  720
TEIFENLDED NLSSRSSIDV LQQANNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-31NAC family protein