PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009143.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 168aa    MW: 19666.6 Da    PI: 9.8185
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009143.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.51.8e-061355651
                           HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
                    HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51
                            + E+ RRdr+++ + +L +ll  +   p++++   + Le+A++ +
  Cse_sc009143.1_g030.1 13 AAKEKERRDRMKDLYYTLATLLQLQ---PHERMPLPDLLERATKVM 55
                           678*********************9...9*************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MRRGSSSSQR TPAAKEKERR DRMKDLYYTL ATLLQLQPHE RMPLPDLLER ATKVMTQWKE  60
RVEWLRSRKK ELEESLNCKS RHKAQQFVQV REVVDSKLEA NLKIMVNNKN VTPFHILRVI  120
EEGGTQVTSS NFCHIGDHIF CTIHAQASNA RVGFDVEFIE SRLLELVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10586.16e-22bHLH family protein