PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009177.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

LBD

Protein Properties

Length: 195aa MW: 21684.6 Da PI: 6.8382

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009177.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	142	1.9e-44	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 +Ca+Ck+lrr+CakdC++apyfp+++p+kfa+vhk+FGasnv k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ Cse_sc009177.1_g060.1 7 PCASCKLLRRRCAKDCIFAPYFPSDNPHKFAFVHKVFGASNVGKMLQELPVDQRADAVSSLVYEANARMRDPVYGCVGAISYLQNQVS 94 7************************************************************************************* PP DUF260 89 qlkaelallkee 100 ql+ ela++++e Cse_sc009177.1_g060.1 95 QLQMELAMAQAE 106 ******9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MAPGHSPCAS CKLLRRRCAK DCIFAPYFPS DNPHKFAFVH KVFGASNVGK MLQELPVDQR 60 ADAVSSLVYE ANARMRDPVY GCVGAISYLQ NQVSQLQMEL AMAQAEILCI QMDQQEPLAP 120 SPATMANGIV PVHPAHSSMS TEDVVSRVSS DDLSYSCLNS ITNHHHHNHN QYFNFTSNNV 180 IQYDSLKREL SSLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	1e-71	LBD family protein