PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009203.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 352aa MW: 38250.5 Da PI: 5.1329

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009203.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	117.7	7e-37	21	112	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl+k+y++++d++++++isw+++g++f+v++++efak++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g Cse_sc009203.1_g040.1 21 FLTKTYQLVDDKAIDDIISWNDDGSTFIVWNPTEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDCFRRG 99 9***************************************************************99.........******* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 +k+ll++i+r+k Cse_sc009203.1_g040.1 100 EKRLLCDIQRRKI 112 ********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MAPPPPVESS DAASRSLPTP FLTKTYQLVD DKAIDDIISW NDDGSTFIVW NPTEFAKDLL 60 PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNDCFRRGE KRLLCDIQRR KISATTPAQP 120 PATPQAVAPP AAVAVAAVTS PPPRIVSPSE SGEEQVISSN SSRGGGATGS LPRDIANGGT 180 NAELAGENER LRRENVQLNK ELSQMKNLCS NIYVMMSNYA TDKPSEGSSS QPSQPTPTTA 240 LKPLDLLPLK RLAEECIANS LNGDGNSNNN SKVRNGLEGT ESDEMNPRLF GVPIGAKRLK 300 DGGSGEAAAI EQYSELQLQQ PGSDVKSEPL DQNGSNGSSS VDNHESTWRM RQ

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MAPPPPVESS DAASRSLPTP FLTKTYQLVD DKAIDDIISW NDDGSTFIVW NPTEFAKDLL  60
PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNDCFRRGE KRLLCDIQRR KISATTPAQP  120
PATPQAVAPP AAVAVAAVTS PPPRIVSPSE SGEEQVISSN SSRGGGATGS LPRDIANGGT  180
NAELAGENER LRRENVQLNK ELSQMKNLCS NIYVMMSNYA TDKPSEGSSS QPSQPTPTTA  240
LKPLDLLPLK RLAEECIANS LNGDGNSNNN SKVRNGLEGT ESDEMNPRLF GVPIGAKRLK  300
DGGSGEAAAI EQYSELQLQQ PGSDVKSEPL DQNGSNGSSS VDNHESTWRM RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	2e-81	HSF family protein