PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009213.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 452aa MW: 49508.6 Da PI: 5.0292

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009213.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.6	7.6e-40	127	187	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s Cse_sc009213.1_g010.1 127 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKTSA 187 7899******************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSDNGKDPAI KLFGKTIQLP ETLTDSQDAD GAVKSEDRSS SEGSSSSDDQ SNNNNNDNKD 60 QPEEKSMDKE EDRANSTLSE EVTEPNTTST LNENPTTASA ETESANAKAS KSQEEQSEQQ 120 DKTLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR 180 RKNKTSASQY RQITVTEAIP SELGHTVLKP NGTVLTFGSD TPLCESMASV LNIADKTKRQ 240 DSFRKPEELI IPVPSSSDDN TNRPSVTEMQ NCHGFSPQMP CFPPGAPWPY PWSPQMGPAF 300 CPPGYPMPFY PAPPYWVLPG PGPGPGPWSM QWVPPPANYH PAPSTGPISP TLGKHSRAEN 360 GDEDLTKESE PEKSLWVPKT LRIDDPEEAA KSSIWATLGI KNDRSVGVNG SGIFKAFQSK 420 SDEKNTSIKD TSPALQANPA ALSRSRNFQE TS

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSDNGKDPAI KLFGKTIQLP ETLTDSQDAD GAVKSEDRSS SEGSSSSDDQ SNNNNNDNKD  60
QPEEKSMDKE EDRANSTLSE EVTEPNTTST LNENPTTASA ETESANAKAS KSQEEQSEQQ  120
DKTLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN CQRYWTAGGT MRNVPVGAGR  180
RKNKTSASQY RQITVTEAIP SELGHTVLKP NGTVLTFGSD TPLCESMASV LNIADKTKRQ  240
DSFRKPEELI IPVPSSSDDN TNRPSVTEMQ NCHGFSPQMP CFPPGAPWPY PWSPQMGPAF  300
CPPGYPMPFY PAPPYWVLPG PGPGPGPWSM QWVPPPANYH PAPSTGPISP TLGKHSRAEN  360
GDEDLTKESE PEKSLWVPKT LRIDDPEEAA KSSIWATLGI KNDRSVGVNG SGIFKAFQSK  420
SDEKNTSIKD TSPALQANPA ALSRSRNFQE TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-54	Dof family protein