PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009214.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 306aa MW: 34504.9 Da PI: 5.9276

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009214.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.2	5.9e-13	109	160	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ +r+l+P++ ++++ + a+i+ A++++k+L+ Cse_sc009214.1_g010.1 109 QRMTHITVERNRRKQMNEYLAVIRSLMPSS---YAQRGDQASIVGGAINFVKELE 160 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MALETIIYPK GEIGNLGYDY FMQEEHAFDE FLECANSNIT HYQESSNNVH AYWADYYSSP 60 ENCIGAHDMK VELSPTDVVA TSTATTSVGA RKKRRRAKSG KNKEELENQR MTHITVERNR 120 RKQMNEYLAV IRSLMPSSYA QRGDQASIVG GAINFVKELE QQLQTLEAKK RSNNNSVFSP 180 SPQPFSDFFS FPQYSIRPDA NDGSSTSTTK SRLPAMAEIE VTMVESHANI KIFSKKRQRQ 240 LLKLVAGLQC LWITILHLNV TTVEQMVLYT LSVKLEDGCQ LSTVDEIADA VNCLLFTIEE 300 ESLCSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	121	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	6e-74	bHLH family protein