PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009245.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 383aa    MW: 43593.5 Da    PI: 7.254
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009245.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.54.6e-08131151526
                            --SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                             C +f+r G C++Gd C FaHg
  Cse_sc009245.1_g010.1 131 VCADFRR-GSCSRGDLCEFAHG 151
                            5999***.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MASGLNYLTN KKSLRDIDIP PRKLLSRRAS ASSATSPENY MENVYHHQNE HSPRVLPEET  60
LFKKFLPYNT GADSDDEEGD PYAADHFRIY EFKVRKCTRS RSHDWTDCPF AHPGEKARRR  120
CPRRYNYLGT VCADFRRGSC SRGDLCEFAH GVFECWLHPS RYRTEACKDG KNCQRKICFF  180
AHTQRQLRVV PPEPVVPVGK KHHHNNESSH CCAHCRCHFD IHHTNSPTST LNIDLDNLSP  240
PASPPFSPAI SGAGFSPISR FADRIARAET LGLTHLGNNN DYVHQDTMNE YINNQSLNEL  300
MRSMEAMNME DTNNEYMNMN SRWIEGAGRS SGEYPQFDLS PTQCGSDMGR TFARPNDPKM  360
NNVYGEPSVN NGPDLGWVND LLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.18e-66C3H family protein