PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009290.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 181aa    MW: 20978.7 Da    PI: 10.6493
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009290.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.9e-182660135
                   GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                           C+ C+tt+TplWR gp g+ktLCnaCG++y k+++
  Cse_sc009290.1_g050.1 26 CTDCKTTSTPLWRGGPHGPKTLCNACGIKYNKRRR 60
                           *******************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MDLLDKRSSG ESEEEMNESS GDSRSCTDCK TTSTPLWRGG PHGPKTLCNA CGIKYNKRRR  60
AQLRGLDQNG KGIAKSAVKP NSDLKLNVRL MVPNKNKKPQ QQRQQEKLQH QRRQVKLQLQ  120
RQREALQQRR QQEQEQQQHQ EQQQPRKRST YERGKPWWNK LGEEEQAAIL LMAISCGGSK  180
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16870.11e-19GATA family protein