PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009376.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 237aa    MW: 27465.6 Da    PI: 4.95
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009376.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.51.7e-41201191100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            aCaaC+++rrkC++dC lapyfp+e++++f+n+hklFG+sn++k++++l++ ++++am+s++y++++ra+dPv G++++i++l++q++
  Cse_sc009376.1_g030.1  20 ACAACRYQRRKCTPDCLLAPYFPHERQRQFQNAHKLFGVSNITKIIRHLDRPQKDEAMRSIIYQSDVRAQDPVGGCYRIIHELERQIA 107
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                             ++ael+l+ ++
  Cse_sc009376.1_g030.1 108 MSHAELELVLQQ 119
                            ******998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MTTHNNLINQ PPRSNSTNQA CAACRYQRRK CTPDCLLAPY FPHERQRQFQ NAHKLFGVSN  60
ITKIIRHLDR PQKDEAMRSI IYQSDVRAQD PVGGCYRIIH ELERQIAMSH AELELVLQQL  120
AVCRNVGVQT QNETRDEECF EFNDDEVDCD PCLYEHHGLN EQNHASVCDD FKLLLIDDVT  180
TLDYKETNKP SEESLYNDEN HKDLLKVEKV SYQEYDEERV VLKDAATFAT LSDCKAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.18e-51LBD family protein