PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009413.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 233aa    MW: 25542.3 Da    PI: 6.0209
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009413.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.61.5e-17150186135
                   GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C++Cgt +  Tp++Rrgp g++tLCnaCGl+++ kg+
  Cse_sc009413.1_g010.1 150 CVHCGTRSndTPMMRRGPTGPRTLCNACGLFWANKGT 186
                            **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MYGESEFVEI PVTVPEEIPT GERNVVAYGN DVICEFEGID GGGGGGGGDQ LTLSYCGQVY  60
VFDNVTSDKD FDYTARCSDP RRAASLNRFR QKRKERCFEK KIRYNVRQDV AKRQNRTKGQ  120
FSTTQSPQDP GSWNTGEAEG AGQDLILVTC VHCGTRSNDT PMMRRGPTGP RTLCNACGLF  180
WANKGTLRDL SKKSIDQSPT LAEQVYNCKA DYNGTNFGTP IISSSAAELG FGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.38e-55GATA family protein