PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009466.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 171aa MW: 19513.1 Da PI: 10.4007

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009466.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.7	1.5e-34	56	110	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl Cse_sc009466.1_g010.1 56 KPRLRWTVELHERFVDAVNQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 110 79****************************************************8 PP
2	Myb_DNA-binding	73.6	2.9e-23	58	109	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ Cse_sc009466.1_g010.1 58 RLRWTVELHERFVDAVNQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 109 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MFHSSTTNID LRDHNHNHNH YERSVMSNVA GNINRASAGD AVQGDHSGLV LTTDPKPRLR 60 WTVELHERFV DAVNQLGGPD KATPKTIMRV MGVKGLTLYH LKSHLQKFRL GKQPHKEFND 120 HFMKDRERVS AMEVQRNGSA SSSGPLGRSM NEMQIEVQRR LHEQLEVITM R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	2e-71	G2-like family protein