PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009466.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 379aa MW: 43175.9 Da PI: 6.5749

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009466.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.7	9.2e-53	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL+ k ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wka Cse_sc009466.1_g040.1 11 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKdKcRIGSgLQNEWYFFSHKDKKYPTGTRTNRATTAGFWKA 97 69**************************.9***********943444442456************************* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk+++ +++ +g++ktLvfy+grap+g+ktdW+mheyrl Cse_sc009466.1_g040.1 98 TGRDKAIHLLsNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 141 ***98658899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MMNTGNGQLS VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKDKC 60 RIGSGLQNEW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLLSNS KRIGMRKTLV 120 FYTGRAPHGQ KTDWIMHEYR LDDQYSNEAT PSEVQEDGWV VCRVFKKKNH NRSPFQTDDH 180 QDHTFQAEDD HQLLIDQDIS KHGSGLHTLR SYDCNNIASN TTLFDGSMHL PQLMTPHDHG 240 PYFLAQRQGA HLVNNNDNNE TSTLMMSNMD SSRNLLSLMS ASQGACGCNS GHPSEDKPLL 300 ATSSVTADWS FLDKLLATNQ HPAAVAFDHH SQQGTCHDPS SSQPFHHPDV NASSHIFPFH 360 YLGYETDILK NETLFLDTF

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MMNTGNGQLS VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKDKC  60
RIGSGLQNEW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLLSNS KRIGMRKTLV  120
FYTGRAPHGQ KTDWIMHEYR LDDQYSNEAT PSEVQEDGWV VCRVFKKKNH NRSPFQTDDH  180
QDHTFQAEDD HQLLIDQDIS KHGSGLHTLR SYDCNNIASN TTLFDGSMHL PQLMTPHDHG  240
PYFLAQRQGA HLVNNNDNNE TSTLMMSNMD SSRNLLSLMS ASQGACGCNS GHPSEDKPLL  300
ATSSVTADWS FLDKLLATNQ HPAAVAFDHH SQQGTCHDPS SSQPFHHPDV NASSHIFPFH  360
YLGYETDILK NETLFLDTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	9e-98	NAC family protein