PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009489.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 460aa MW: 51760.2 Da PI: 6.524

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009489.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.7	3e-11	134	211	13	98
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ + ++fa+++ kk + ++ +ede+g e+k+ + + l++GWk+F++ ++L egD +vF+l++ +f +v ++r Cse_sc009489.1_g050.1 134 GYWMGFLRPFAKAYLPKK--DCEMLVEDENGVIDEIKY--NAE--KLGLSAGWKRFASGHNLLEGDAIVFHLVEPYKF--KVYLIR 211 5567788999996454..448***********..555..567*********************9876666..776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MASPAAGDPN PQPSPLQNSD QPPVFYLSDS ADNNFTISQL NPSSKTPNPN PNPNPPINSP 60 PTNKRRKTKP VRFGGPTVIE PVVQDSSSKK SRSPKENSDV KSLAEIRAEE VQASLGTEHP 120 SCVKLMARGH VDPGYWMGFL RPFAKAYLPK KDCEMLVEDE NGVIDEIKYN AEKLGLSAGW 180 KRFASGHNLL EGDAIVFHLV EPYKFKVYLI RADNLNEVDG ALCLLNMEEQ MVPEMDMPSP 240 KPKRRKLPKS LPLLEQSGNT SEEVGSEVLE GYKPELSLEE FKTMEDFHIM VKGVCIDSEL 300 PDDVRMNYYK LCTARKGLLH DDLAEGLNHK LVAGMIGETV NIANKIKNCQ ITTTKGEFEI 360 WDNHLKSFGI MGMKVEFLRE RITTLSRIVS ESECNLDVQK YVEAKREHKR VEDDIQGITE 420 KLVGLKESSR KFKRIVDGLK EKIEMHEEKL QKQVNAFKIV

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MASPAAGDPN PQPSPLQNSD QPPVFYLSDS ADNNFTISQL NPSSKTPNPN PNPNPPINSP  60
PTNKRRKTKP VRFGGPTVIE PVVQDSSSKK SRSPKENSDV KSLAEIRAEE VQASLGTEHP  120
SCVKLMARGH VDPGYWMGFL RPFAKAYLPK KDCEMLVEDE NGVIDEIKYN AEKLGLSAGW  180
KRFASGHNLL EGDAIVFHLV EPYKFKVYLI RADNLNEVDG ALCLLNMEEQ MVPEMDMPSP  240
KPKRRKLPKS LPLLEQSGNT SEEVGSEVLE GYKPELSLEE FKTMEDFHIM VKGVCIDSEL  300
PDDVRMNYYK LCTARKGLLH DDLAEGLNHK LVAGMIGETV NIANKIKNCQ ITTTKGEFEI  360
WDNHLKSFGI MGMKVEFLRE RITTLSRIVS ESECNLDVQK YVEAKREHKR VEDDIQGITE  420
KLVGLKESSR KFKRIVDGLK EKIEMHEEKL QKQVNAFKIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-30	B3 family protein