PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009507.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 248aa    MW: 28260.9 Da    PI: 4.9504
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009507.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.11.5e-161360148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT++Ed ll ++++++G g W++I+ + g+ R++k+c++rw++yl
  Cse_sc009507.1_g020.1 13 KGAWTPQEDMLLRNCIQEYGEGKWHLIPLKAGLSRCRKSCRLRWLNYL 60
                           79********************************************97 PP
2Myb_DNA-binding46.67.6e-1566110147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +g + ++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++
  Cse_sc009507.1_g020.1  66 KGDFEEDEIDLILRLHKLLGNR-WSLIAGRIP-GRTANDVKNYWNTH 110
                            67899*****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MRPSSSTGLR LRKGAWTPQE DMLLRNCIQE YGEGKWHLIP LKAGLSRCRK SCRLRWLNYL  60
RPNIKKGDFE EDEIDLILRL HKLLGNRWSL IAGRIPGRTA NDVKNYWNTH IRPRSNKQNN  120
EPKDITTAVT VIKPQPRILS KTVNSNPPMA APQDYNLVKS THDAVETAFD ISSGLVSSPI  180
VSDAKINEYM VELFDNEEKE FDGEIGWSLD GTPFEGEALD AEQEDGESSV FDLPIDEFMW  240
ECLNSDNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.16e-61MYB family protein