PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009543.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 123aa MW: 14474.5 Da PI: 8.8694

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009543.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.5	6.5e-15	32	120	3	90
EE-...-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 3 kvl.tpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 kv t+ + + +r+++p+k+a +h g + + l ++d++g++W+v ++++ + + ++ + ++F +++L +gD+v F++ Cse_sc009543.1_g030.1 32 KVVsTTDSDIRYCRMRIPRKYAMAHfpeiG---DKAVSLNIMDTDGKEWRVSFSHWPYYDNTYAMSDLRDFYVSKNLHAGDTVAFYRR 116 555155666777***********97633...35678*******************99999******************53 PP SSSEE CS B3 86 grsef 90 + +++ Cse_sc009543.1_g030.1 117 D-TDG 120 3.544 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
VYAREISWYK KVLLLNDPLY SLKSVLTPLF DKVVSTTDSD IRYCRMRIPR KYAMAHFPEI 60 GDKAVSLNIM DTDGKEWRVS FSHWPYYDNT YAMSDLRDFY VSKNLHAGDT VAFYRRDTDG 120 KIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21550.1	1e-19	B3 family protein