PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009585.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 402aa    MW: 44740.6 Da    PI: 9.9001
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009585.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.51.6e-17231264134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
  Cse_sc009585.1_g010.1 231 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 264
                            *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MLKCASKSRE WCMQQLASKA NNLPLKDFNH PLGSICFHFS CVCVLINQIQ MTPIFLNSAS  60
SNYSPYASDH QHHDHHHQLL ISPNSQASSS SNSLTTHMFL NSKVYDDQNG IFNRELQATR  120
PRHEGDNFGS QAYKDHRIEN YDEKGAKFPT WNKSGVNNMN NDQSHMKWMS SKMRVMLKMK  180
KSDPVSLKIF SSNTREVTKL EDHKSPTSPM EETDNSSNST SSNNNMPIRV CSDCNTTKTP  240
LWRSGPCGPK SLCNACGIRQ RKARRALAAA LAQNGDNNVS INKPIVAQLK VKKTLHKDHK  300
KPSNGLVTKL KKRQYTKQII TNTTHVTPSP SVSPSPSPSP SPSPSPSPSP SPSSSSPARK  360
NCVEEFLVNL SKNLTCYRVF PQDEKEAAIL LMALSCGFAH ET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.16e-19GATA family protein