PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009642.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 134aa    MW: 15202.2 Da    PI: 7.5804
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009642.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK58.51.3e-185399248
                 RWP-RK  2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                           e++isle+++k+F +pi +AA  L v+ ++LKriCR++GI+ WP+R+
  Cse_sc009642.1_g040.1 53 ESSISLEEIKKHFGKPIDEAAAILHVSRSTLKRICRNLGIREWPSRQ 99
                           789*******************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MSSIQEIASV PFNWNIESRL SLITCDSGVV GTSHGDVLYP EKVITHRKRR RSESSISLEE  60
IKKHFGKPID EAAAILHVSR STLKRICRNL GIREWPSRQD NDRSVGFEET NDLYREAVKV  120
DVLEDSLLLR SPGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14751RKRRR
24752RKRRRS