PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009737.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 313aa    MW: 32976.9 Da    PI: 9.6353
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009737.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.71.5e-061111231527
                            -TTTTT-SS-SSS CS
                zf-CCCH  15 CkyGdrCkFaHgp 27 
                            Ck+Gd+C+FaH++
  Cse_sc009737.1_g010.1 111 CKFGDKCRFAHSE 123
                            ***********95 PP
2zf-CCCH35.61.6e-11284308227
                            -S---SGGGGTS--TTTTT-SS-SSS CS
                zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                            kt+ C +fa+ G+C +GdrC+FaHgp
  Cse_sc009737.1_g010.1 284 KTKMCENFAK-GQCTFGDRCHFAHGP 308
                            899*******.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MEFGGRKRGR QDGSFNGAQK RPRDESENNF TPGVGSKSKP CTKFFSTSGC PFGEGCHFLH  60
YVPGGYNAVK QLTNVGGPPG RKPPMQQPFA EGPPTPAKGK ICNRINTPEG CKFGDKCRFA  120
HSEMELGSKS SFPAYEDPRA QPGPFNYGGG GGGGYQGRME QGPPGLAAAA NFGQSATAKI  180
SIDGALAGPI IGKGGVNSKQ ICRLTGVKFA IRDHDTDPSQ KNIELEGSFD QIKQASAMVH  240
ELIVNLRSGG GGGGANGPPQ RNFGGFQQQQ GGQGLGHGGA NKIKTKMCEN FAKGQCTFGD  300
RCHFAHGPEE LRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12130.13e-48C3H family protein