PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009749.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 323aa    MW: 36143 Da    PI: 10.4244
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009749.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK23.41.2e-071181471746
                 RWP-RK  17 pikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                            + ++AA   gv+ + LKriC  +GIk WP+
  Cse_sc009749.1_g040.1 118 SFEEAADIFGVSRSKLKRICTSLGIKGWPY 147
                            6799*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MMSNNGVIHS KASKSLALTK HPTYLEMVSD AIVTLKERTG SSQYAIRKFI QDKYKDHLPA  60
KFKKRLSNRL KKFVASKKLV KVKPFYTLPS TAKPAAKKTL AKKKPTKAAA KPNLTPKSFE  120
EAADIFGVSR SKLKRICTSL GIKGWPYTPN KSDSHSNFRG SNEHTPATHS EHAMYSSTRV  180
ETFLIDGLGQ PKTTLKNLVK PLTIKATYKE DIVRFPFILS DGLTNLKEQI ATRFPLKLES  240
FRLKYEDKDG DLILIACDSD LDLSANDFRR PDGHTVIRLM ADSILGLSYG LFFGHLQSVG  300
LNFPIYISEV AVSEEALCTK KKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.17e-12Nin-like family protein