PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009775.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 229aa    MW: 25917.4 Da    PI: 9.0696
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009775.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.11.6e-074187153
                G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
                           k+r +Wt+e H++F+ea++      +A P +i e+m+ k  t  +++SH Qk+
  Cse_sc009775.1_g050.1 41 KQREKWTHEEHKKFLEALKLY---GRAWP-QIEEHMGNK--TAIQIRSHAQKF 87
                           79****************988...48999.7******98..8999*******9 PP
2Myb_DNA-binding48.32.3e-154387147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           r +WT eE++++++a k++G   W  I ++mg ++t+ q++s+ qk+
  Cse_sc009775.1_g050.1 43 REKWTHEEHKKFLEALKLYGRA-WPQIEEHMG-NKTAIQIRSHAQKF 87
                           789*****************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVEDQSEGFK SNTGTKNQID DQFTPCEDYA LKSRKPYKIT KQREKWTHEE HKKFLEALKL  60
YGRAWPQIEE HMGNKTAIQI RSHAQKFFSK VVRQSSDIDG TKVDHIEIPP PRAKRKPAHP  120
YPRNVYIPSK KGHLTVVPTS CSEESNHENT SPDSPDQYAS IQSLKLFGKT VFVMDSARPS  180
SPDTVTPLSL NLMLSQEPEC PTTPILSSDG IFGKMGDKYA KGFLAYKTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.14e-38MYB_related family protein