PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009780.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 203aa MW: 23256.4 Da PI: 10.4072

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009780.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.4	1.7e-21	78	185	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCkaklkv 68 kfY+eYA+e GF+vr+ ++++k+n+ + + f+Cs+eg + + +++ ++ +rr+ra++r+gCka l++ Cse_sc009780.1_g030.1 78 KFYKEYAREGGFEVRRGGQSNRKKNK--ILKYFCCSREGVKPSPNDDiskkdksktdtpssdiaevvKVIKRRKRASQRCGCKALLRL 163 6**************999987777..8889***999988889999**********99999************** PP FAR1 69 kkekdgkwevtkleleHnHela 90 +++ ++k++v+++ ++HnH+l+ Cse_sc009780.1_g030.1 164 RQTPENKFVVYTFFEKHNHSLV 185 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MKTINPHQTT YSTYSKLPSE PSTPRSTNIV QDNVVDAESV TQVGSYQPTP PGSKFWIPGA 60 KNKPVEGTQF DTIEQALKFY KEYAREGGFE VRRGGQSNRK KNKILKYFCC SREGVKPSPN 120 DDISKKDKSK TDTPSSDIAE VVKVIKRRKR ASQRCGCKAL LRLRQTPENK FVVYTFFEKH 180 NHSLVHENDY RYLRAARKLT FSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	7e-12	FAR1 family protein