PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009817.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 226aa    MW: 25256.1 Da    PI: 7.6982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009817.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.61.1e-08119159954
                            HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                             r RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  Cse_sc009817.1_g030.1 119 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAVHYMKFL 159
                            699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MDMMTMMMDL DKLPDPFSIP FQDLSDSSIM DLNFSSENST TNHNGPSSLM YPTQDHLAIP  60
PSHFPRASWL HQKPDSVEAM REMIFRMAAL QPVQIDPEAV KPPKRRNVKI SKDPQSVAAR  120
HRRERISERI RILQRLVPGG TKMDTASMLD EAVHYMKFLK KQVETLEQAA VPSTAVCSIM  180
TTTGMNSTVA GLCPTNMNHH GGNNNYMIRA CGESAGHMVG SMELLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.15e-40bHLH family protein