PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009902.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family VOZ
Protein Properties Length: 487aa    MW: 54005.6 Da    PI: 5.3922
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009902.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ401.32e-1232024261217
                    VOZ   1 pppsaflgpkcalwdctrpaqg........sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipec 80 
                            pppsaflgpkcalwdc+rpaqg        + w+ dycss+ha++a neg  g+tpv+rpkgi+lkd+llfaalsak+qgk+vg+pec
  Cse_sc009902.1_g030.1 202 PPPSAFLGPKCALWDCPRPAQGwcadsrpvQGWFPDYCSSLHAAIAQNEGRFGMTPVIRPKGIELKDTLLFAALSAKTQGKDVGVPEC 289
                            89*******************9554444434699****************************************************** PP

                    VOZ  81 egaatakspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewh 168
                            egaatakspwna+elfdls++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++e g lkrsyymdpqp++ +ewh
  Cse_sc009902.1_g030.1 290 EGAATAKSPWNAPELFDLSVFEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINESGWLKRSYYMDPQPMKFLEWH 377
                            **************************************************************************************** PP

                    VOZ 169 lyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217
                            lyeyei+++da+alyrlelklvd+kks+kgk+++ s+adlqk++ rlta
  Cse_sc009902.1_g030.1 378 LYEYEISKCDACALYRLELKLVDGKKSPKGKIANVSVADLQKQMRRLTA 426
                            ***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MGKGTKCKSG SHQIFKDRAK NRVEDLHGMF NDLQSARKES RSIDVAVLEE QVNQMLKEWK  60
NELNQPSPAS SLQQGGSLGP FSPDISRLLQ LCDEEDDATS GLAAPKPDPD GLKPVENPAF  120
HETFAAQTSQ EQGFQLVDQC KGSPSGVNNI GAHNIGVANQ LDYFSFDLPQ DFEQTFFTGF  180
NGMGQEDASL NQMTGYLPTI SPPPSAFLGP KCALWDCPRP AQGWCADSRP VQGWFPDYCS  240
SLHAAIAQNE GRFGMTPVIR PKGIELKDTL LFAALSAKTQ GKDVGVPECE GAATAKSPWN  300
APELFDLSVF EGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR KQVINESGWL  360
KRSYYMDPQP MKFLEWHLYE YEISKCDACA LYRLELKLVD GKKSPKGKIA NVSVADLQKQ  420
MRRLTAEFPL DNNTKRSVKG RGKANVKDNS GVAVVYPAPD LTPPSDDIDN GANAPFNYLV  480
DDIGGYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0VOZ family protein