PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009921.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 520aa    MW: 58240.6 Da    PI: 5.4321
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009921.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS436.12.6e-1331515192373
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                            +e L++cA+av+++d+  a++l++ l+ l+s +gdp qRl ay++e+L ar+++s+s +ykal+++e +     e ++++ l++e++P
  Cse_sc009921.1_g010.1 151 KEGLFACAKAVAENDTLTAEWLISMLRPLVSVSGDPAQRLGAYMLEGLVARMSSSGSFIYKALKCKEPT---GGELFSYMLLLYEACP 235
                            6779****************************************************************9...9999999999****** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                            ++kf++l aN aI ea+++e+++HiiDf+i qG+QW++L+qaLa+Rp+gpp+lRiTg+++ +++  +   l+ +g+rLak+Ae+++vp
  Cse_sc009921.1_g010.1 236 YFKFGYLSANGAIAEAIKNEDKIHIIDFQIAQGGQWVTLIQALAARPGGPPKLRITGIDDVRNSfaRGGGLNIVGQRLAKLAESCKVP 323
                            ************************************************************98889999******************** PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            fef++ v  + +d++l++++v+pgEalaVn+ + lh+++desv+ +++rd++L+l+kslsPkvv++veqea+ n+++F++rf e ++y
  Cse_sc009921.1_g010.1 324 FEFHA-VPVSGSDIQLHHFKVQPGEALAVNCPFVLHHVPDESVNPQNHRDRLLRLIKSLSPKVVTLVEQEANVNTAKFFHRFQEVFSY 410
                            *****.7999****************************************************************************** PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                            y a+f+s++a+l r++++ri+vE+++l+ eivn++aceg er+erhe  +kWr+r+++aGF+p+pls++++ ++k+ll+ + +  yr+
  Cse_sc009921.1_g010.1 411 YLAMFESIDATLERDHKDRINVEQHCLAGEIVNILACEGVEREERHELHGKWRSRFKMAGFTPYPLSSYVNGTIKTLLESYCD-KYRL 497
                            *********************************************************************************95.5*** PP

                   GRAS 352 eeesgslvlgWkdrpLvsvSaW 373
                            ee++g+l+lgW++r Lvs +aW
  Cse_sc009921.1_g010.1 498 EERDGALFLGWMNRDLVSSCAW 519
                            ********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MDENASNQPY YWTTPTQQHM DQNLYLGDVS QGSHLSNQTP EFANNSSSSV SLSPNGSPIS  60
LQDSHSFQPD PYHSPDYTYS SHESKAGFEE NVDDLQLRLS EIQTILDTDQ DFAGSFDVSS  120
WVETGLDNNN IHPVNDQYRI MKQIIAKGDL KEGLFACAKA VAENDTLTAE WLISMLRPLV  180
SVSGDPAQRL GAYMLEGLVA RMSSSGSFIY KALKCKEPTG GELFSYMLLL YEACPYFKFG  240
YLSANGAIAE AIKNEDKIHI IDFQIAQGGQ WVTLIQALAA RPGGPPKLRI TGIDDVRNSF  300
ARGGGLNIVG QRLAKLAESC KVPFEFHAVP VSGSDIQLHH FKVQPGEALA VNCPFVLHHV  360
PDESVNPQNH RDRLLRLIKS LSPKVVTLVE QEANVNTAKF FHRFQEVFSY YLAMFESIDA  420
TLERDHKDRI NVEQHCLAGE IVNILACEGV EREERHELHG KWRSRFKMAG FTPYPLSSYV  480
NGTIKTLLES YCDKYRLEER DGALFLGWMN RDLVSSCAWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein