PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010007.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 246aa    MW: 28312 Da    PI: 8.841
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010007.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.74e-301059251
                           ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                 SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                           rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+e+s+
  Cse_sc010007.1_g010.1 10 RIENKINRQVTFSKRRGGLLKKAHEISVLCDAEVALIVFSNKGKLFEFST 59
                           8***********************************************96 PP
2K-box105.75.5e-35821739100
                  K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                            +++a+  s++ e++kLk++ e Lqr++Rh++Ged+esLslke+q+LeqqL+++lk+iR++Kn+ll+e+i+elqkk k++qe+n++L+k
  Cse_sc010007.1_g010.1  82 ATDATPRSWTLEYNKLKSRAELLQRNHRHYMGEDIESLSLKEIQNLEQQLDTGLKNIRTRKNQLLHESISELQKKGKAIQEQNTTLTK 169
                            56788899******************************************************************************** PP

                  K-box  97 klee 100
                            k++e
  Cse_sc010007.1_g010.1 170 KIKE 173
                            *987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGRGKVQLRR IENKINRQVT FSKRRGGLLK KAHEISVLCD AEVALIVFSN KGKLFEFSTD  60
SCMESILERY ERYSYTERQL VATDATPRSW TLEYNKLKSR AELLQRNHRH YMGEDIESLS  120
LKEIQNLEQQ LDTGLKNIRT RKNQLLHESI SELQKKGKAI QEQNTTLTKK IKEKEKDKTI  180
TENVQWEQHN YVDHDTSFLM PQPPPGLNMG GNYNQSGGGA GEGADGMTNE LDLSLQYSCH  240
MRCFPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.16e-91MIKC_MADS family protein