PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010012.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 307aa MW: 36285.3 Da PI: 7.3819

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010012.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	45.7	2.1e-14	3	62	67	127
NAM 67 kyatgkrknratk.sgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +++g+r+nr+t+ gyWk+t kd +v + +g +vg k++Lv+y+ a++ +k++W+mhey+ Cse_sc010012.1_g040.1 3 MTPNGDRPNRMTRdFGYWKTTKKDSTVSDDaSGLKVGKKRSLVYYD--ASN-KKSQWLMHEYT 62 5689****77747********99867788******3..333.68******7 PP
2	NAM	89.1	7.7e-28	174	297	2	126
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 G+rF Pt +e++v+yL++k+e+ + + + +d y P +L +++++ e++wyf ++rd++y++g+r+nr + + g+Wka+ + Cse_sc010012.1_g040.1 174 KHGYRFCPTHSEIIVHYLQPKIETGEQHPNCRYYIADFYGDTPDNLAENHRHCENKWYFLTSRDRNYPNGNRPNRrIKNFGFWKASTT 261 68*******************99977644477779*****977788899****************67779**99 PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmhey 126 +k v++ +ge vg k+L++y++ +kt W+mhey Cse_sc010012.1_g040.1 262 NKVVCDDvTGEIVGRMKSLAYYDK---YKRKTPWLMHEY 297 999998889999******43...3358****** PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MRMTPNGDRP NRMTRDFGYW KTTKKDSTVS DDASGLKVGK KRSLVYYDAS NKKSQWLMHE 60 YTTINPNIPV GSIEDKMKLT HWVLCEIYKK KKDDSEQEVL SARNQHLDEL SRRQRISMHH 120 QGSSYQLSAS THVFQQEVQS TYQDNQSIES NEDNFCFTEE EASELLNDYA DSLKHGYRFC 180 PTHSEIIVHY LQPKIETGEQ HPNCRYYIAD FYGDTPDNLA ENHRHCENKW YFLTSRDRNY 240 PNGNRPNRRI KNFGFWKAST TNKVVCDDVT GEIVGRMKSL AYYDKYKRKT PWLMHEYINN 300 NPQLEEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	9e-17	NAC family protein