PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010068.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 186aa    MW: 20811.7 Da    PI: 5.0881
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010068.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.00127999121
                           EEETTTTEEESSHHHHHHHHH CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
                           y+C++C ++  ++++ ++H r
  Cse_sc010068.1_g030.1 79 YRCKKCRRMVASQEQIVSHER 99
                           9******************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MSAQMESAME VSGQAAQMES AMEVSGQAAQ MESAMKVSGQ TAQMESAMEV SGQTAQMESA  60
MEVSNQTDVK SEEKPQMIYR CKKCRRMVAS QEQIVSHERG QGKESFKWKK RAGDAENGQP  120
ECTSIFVEPM KWMQPVEEGY VAQKLQCLGC NYRLGYFNWA GMQCNCGAWV IPAFQLHSSR  180
LDECRM