PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010112.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 331aa    MW: 36147.8 Da    PI: 9.7242
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010112.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.49.1e-10555146
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                           + +W++eE+  l  +++++G g W++I r +      ++R+  ++k++w++
  Cse_sc010112.1_g010.1  5 KTKWSPEEEAALNAGIAKYGLGKWSKIIRDVEfakvlEKRSNVDLKDKWRN 55
                           579**********************************99***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MGAPKTKWSP EEEAALNAGI AKYGLGKWSK IIRDVEFAKV LEKRSNVDLK DKWRNTSLIA  60
SGRSRQKARP KMSKMQTIYE DETLSSPRKE RDLKDCMLDS PAILAGSSQI GSSKVPMPRL  120
DNLILDAMKE KRGSSRAAIS EYLQEKHSAP PNLNKLLHAE LKSLMNCGKL LKAKHRYKIG  180
PSSSCLGPKR SPSSLPLEVK QGCFSNGETN AIKILTKAEN DAELEKIWSM TPQQTAAIAI  240
EVVAEAETTI RVLTKAGIDA ELEKMRSMTP QQAAGMAMKA VAEAEAAILE AERAEKAAEA  300
AEADAEKAKV FADATMGIKA AYPFHMTMAT M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-41MYB_related family protein