PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010115.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family AP2
Protein Properties Length: 338aa    MW: 38205.1 Da    PI: 8.5246
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010115.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.82e-1145101155
                    AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                            s y+GV++++++gr++A+++d  ++n  ++k+ + g ++ ++ Aa a++ a++k++g
  Cse_sc010115.1_g030.1  45 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEKAAAHAYDLAALKYWG 101
                            57*******************99998898888888*****99*************98 PP
2AP251.32.8e-16144195155
                    AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  Cse_sc010115.1_g030.1 144 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 195
                            89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGKVSTKKNA NANANNNDKN KKPVIGKAKR TRKTVQRDSP PQRSSIYRGV TRHRWTGRYE  60
AHLWDKNCWN ESQNKKGRQG AYDDEKAAAH AYDLAALKYW GQDTILNFPL ETYEEELREM  120
ESLSKEEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY LYLGTYATQE  180
EAATAYDMAA IEYRGLNAVT NFDLSRYIKW LRPGQTDSNN SNGIPTSLDL NPNSQPETSS  240
SGETSTSVPA PPSRGSGSGS ALGLLLQSTK YKEMRERTSV VDSPTTPPES DMPRRSFPDD  300
IQTYFDCHES NSYTECEDNI FADLNSFDAP MFQCELDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.13e-95AP2 family protein