PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010165.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 208aa    MW: 23164.5 Da    PI: 7.4638
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010165.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.91.8e-2090124135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Cse_sc010165.1_g020.1  90 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 124
                            ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MHQPNSFSML LTMPYDQHTY PYGSSSSSVD CTLSLGTPST RLTSSDESSR FCWDFLNSGD  60
DSSSPPGLNK SSRGGATNVA TVESLLTRRC ANCDTTSTPL WRNGPRGPKS LCNACGIRFK  120
KEERRANATT TTVANGGDTK EMYNNTTWMH YTQPSSQKLP TYYTPSAAVG SHEFRFIHDD  180
VDDRDSTFLS WRLNVTDRPG LVHDFTRY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.19e-49GATA family protein