PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010171.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 209aa    MW: 23939.7 Da    PI: 6.058
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010171.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.45.4e-13106193197
                            EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                            f+k +++s+  +   l lp +f++e+    k ++  +tl de+g +   k+    +++++ l+ GW++F  +++L  gD +vF+l++ 
  Cse_sc010171.1_g030.1 106 FVKPMLQSYRYS---LPLPSDFCRENlP--K-NDAIITLIDEEGDEVPTKY--LAYKDAFKLSLGWNGFSTSHELVCGDALVFQLVEP 185
                            677887777776...56*********42..2.4568***************..*******************************9986 PP

                            SEE..EEEEE CS
                     B3  88 sefelvvkvf 97 
                            + f  +v ++
  Cse_sc010171.1_g030.1 186 TVF--KVYII 193
                            777..66665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MRIFPLVFLV VYERFENVFA LRIFLSFKLY MMKRAKPRVI GTEMVEVRRS SRVASSPAPV  60
YKEIVVYERV TMIKSGGKYA SDEATYWATT KAEEIKTSLE GGYPSFVKPM LQSYRYSLPL  120
PSDFCRENLP KNDAIITLID EEGDEVPTKY LAYKDAFKLS LGWNGFSTSH ELVCGDALVF  180
QLVEPTVFKV YIIRCKGYEE GENNEALEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-35B3 family protein