PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010213.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 254aa    MW: 28221.8 Da    PI: 6.7321
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010213.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.95.6e-142064147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
  Cse_sc010213.1_g020.1 20 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 64
                           789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MGDSSSGKKV RKPYTITKSR ESWTDEEHDK FLEALQLFDR DWKKIEDFVG SKTVIQIRSH  60
AQKYFLKVQK NGSIAHVPPP RPKRKATHPY PQKAPKNVLL PLQASMGYPS SLSGLAPGYS  120
PWDDTSLFIS QSGEIMPSQD EYELHGFEGM HASDTGSKGA GKISNISSSG IGSSSREMPT  180
SEVSNPGEQA SIPHGIPDFS EVYSFIGSVF DPESKGHVQK LKEMDPINFE TVLLLMRNLT  240
VNLSNPEFEP MDYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-111MYB_related family protein