PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010310.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 260aa MW: 29673.8 Da PI: 5.1721

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010310.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.8	1.4e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l +++++G +W + ++ g+ R++k+c++rw +yl Cse_sc010310.1_g010.1 14 KGAWSEEEDHKLRAYIQRYGHWNWGLLPKFAGLSRSGKSCRLRWMNYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	53.2	6.7e-17	68	112	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T eEd ++++ +++lG++ W++Ia++++ gR+++++k+rw+++l Cse_sc010310.1_g010.1 68 GNFTLEEDGIILNMHNKLGNK-WSAIAKKLP-GRSDNEIKNRWNTHL 112 89*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MAKALSAKTN VFKKGAWSEE EDHKLRAYIQ RYGHWNWGLL PKFAGLSRSG KSCRLRWMNY 60 LRPDMKHGNF TLEEDGIILN MHNKLGNKWS AIAKKLPGRS DNEIKNRWNT HLIKRAHQNQ 120 NVLETGHIGT TANSKEVSSV ELHEDNESFS VEASSESTSC SSRSETSSYW FSGSDYVVSG 180 DIAPPISSYE LTEDFWTEPF LPDITSSLDS ELSPLHIADD FVTPSSSWQD MMMSDDFSWS 240 MLDTYVEHNS EFINSWDSIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	2e-47	MYB family protein