PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010360.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARR-B
Protein Properties Length: 586aa    MW: 64329.2 Da    PI: 7.0976
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010360.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.66e-28209262155
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                            kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  Cse_sc010360.1_g010.1 209 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 262
                            79*******************.********************************8 PP
2Myb_DNA-binding37.74.9e-12211261148
                            TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                            r  W+ e+++++v av+qlG +   +k+I + m+  g+t++++ s++qk++
  Cse_sc010360.1_g010.1 211 RVVWSVELHQQFVGAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 261
                            678**********************************************97 PP
3Response_reg82.31.6e-27251331109
                            EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHH CS
           Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeeda 86 
                            vl+vdD+ + +++l+q+l++  y +v++++++++al+ll+e++  +D++l D+ mp+mdG++ll+     e++lp+i+++a g  +++
  Cse_sc010360.1_g010.1  25 VLVVDDDVICLKILEQMLRRCSY-NVTTCSQATAALNLLRERKgcFDVVLSDVHMPDMDGFKLLELVGL-EMDLPVIMISADGRTNLV 110
                            89*********************.****************************************87754.558*************** PP

                            HHHHHTTESEEEESS--HHHHHH CS
           Response_reg  87 lealkaGakdflsKpfdpeelvk 109
                            l+ ++ Ga d+l Kp+ +e+l +
  Cse_sc010360.1_g010.1 111 LRGIRHGACDYLIKPIREEQLKN 133
                            ********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 586 aa     Download sequence    
MTAGNSFGSG SDTGVSDQFP VGLRVLVVDD DVICLKILEQ MLRRCSYNVT TCSQATAALN  60
LLRERKGCFD VVLSDVHMPD MDGFKLLELV GLEMDLPVIM ISADGRTNLV LRGIRHGACD  120
YLIKPIREEQ LKNIWQHVIR KKWNENKEHE HSGSVDDKDR QKRGGDDTDY ASSVNEGGDG  180
ILASHKKRRN VKEEDDGELE TDEPGSSKKP RVVWSVELHQ QFVGAVNQLG IDKAVPKRIL  240
ELMNVPGLTR ENVASHLQKF RLYLRRLSGM AQQGGGPNSF CGSMEQSQQT PKLGPYGRFE  300
IQALAASGQI PPQTLAALHA ELLGRPTANV GLPVIDYQPL LQPSKRMPVD HVMPYGQPNP  360
SNFTKQIPQP IIEDVHSGLG PWHSNNMVGN YGQLGGQNGH NMLMGMSQNQ SQTQQLQKQS  420
ISVQPSRLVV PAQSAADFHG GNNGISVNQT NSYSRSSVID YSPVLPQSDG SSNGVGQRSE  480
RDAKTMGGQS GNNVGERQIS FGESVHVFDQ RPLRNLGFVG KGTSIPSRFA IYEAEAPTSN  540
LYNGDNNAGR RVKQEPNIDF LDNSKAGGIQ IRHRMSQNDL MSVYSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-112ARR-B family protein