PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010403.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 796aa MW: 88540.4 Da PI: 5.7177

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010403.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.9	9.5e-29	481	531	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l+++F++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ Cse_sc010403.1_g030.1 481 EKTITLEMLRQHFAGSLKDAAKNMGVCPTTLKRICRQHGIQRWPSRKIKKV 531 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
MFQNIGFKDI TRLAMDENVF TFENPSDSLM DFDYMDELLL DGCWLQATDG SEILNNNTSA 60 SNPPFDPSVQ WPKLDSNTEN PKPNDNLLAP EGNSLKSHVK SLITLPNQSE NLAEQSKRWW 120 IAPQTSSGPS ISVMERLIYA IDNIKHYTVD KNVLIQVWVF KEKVPEWTPD VRLFKIEEYP 180 RVSHAQAQGV RGSVAVPVFY QDNESCIGVF EVIMTTQKSN YSSEIQSVCK ALEAFDLRSS 240 EDSNTQKIKV NNGFYHPALS EICEALKSAC TIHNLPLAQT WIPCIQQDNK GGCRHSNENL 300 IRCISTVDSA SYVSDLRFKD FQEACSEHHL FIDQGVVGKT FTTMGPCYSS DVTLYKKTDY 360 PLAHHASIFD LHAAVAIRLR TTYAATVDFV LEFFLPVDCK NTEDQQGIIN SLLIIIQKVC 420 GSLRFVTETE LQEGVNDGLI VGSDTETMPR VQEIDGPGPG SGSGSGSGSG VEKRRAGAKL 480 EKTITLEMLR QHFAGSLKDA AKNMGVCPTT LKRICRQHGI QRWPSRKIKK VGHSLRKIQL 540 VMDSVHGGSG SFQIESFYSN FPKLASPDPS KPTNLPFSTT KIETLDLKTT DGATSGSPSS 600 SSGSPSSSSG HSFSGRLHQV PLCDEDTGDG AHKRTKSEDT GEGTHKRTKS DTDIHTFCAS 660 NDQDQDQDQD QDEEAKSLTE PPKCQKLPPK PRIKPEGHLW RVKVTFGEEN IRFRMQKGWG 720 YNELVQETAK RFSLNDISGY QLRYLDDDSE WVLLTCDADV EECIDVYRSF KGGTIRLTLR 780 EPQVRVGSSL GSNALL

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

MFQNIGFKDI TRLAMDENVF TFENPSDSLM DFDYMDELLL DGCWLQATDG SEILNNNTSA  60
SNPPFDPSVQ WPKLDSNTEN PKPNDNLLAP EGNSLKSHVK SLITLPNQSE NLAEQSKRWW  120
IAPQTSSGPS ISVMERLIYA IDNIKHYTVD KNVLIQVWVF KEKVPEWTPD VRLFKIEEYP  180
RVSHAQAQGV RGSVAVPVFY QDNESCIGVF EVIMTTQKSN YSSEIQSVCK ALEAFDLRSS  240
EDSNTQKIKV NNGFYHPALS EICEALKSAC TIHNLPLAQT WIPCIQQDNK GGCRHSNENL  300
IRCISTVDSA SYVSDLRFKD FQEACSEHHL FIDQGVVGKT FTTMGPCYSS DVTLYKKTDY  360
PLAHHASIFD LHAAVAIRLR TTYAATVDFV LEFFLPVDCK NTEDQQGIIN SLLIIIQKVC  420
GSLRFVTETE LQEGVNDGLI VGSDTETMPR VQEIDGPGPG SGSGSGSGSG VEKRRAGAKL  480
EKTITLEMLR QHFAGSLKDA AKNMGVCPTT LKRICRQHGI QRWPSRKIKK VGHSLRKIQL  540
VMDSVHGGSG SFQIESFYSN FPKLASPDPS KPTNLPFSTT KIETLDLKTT DGATSGSPSS  600
SSGSPSSSSG HSFSGRLHQV PLCDEDTGDG AHKRTKSEDT GEGTHKRTKS DTDIHTFCAS  660
NDQDQDQDQD QDEEAKSLTE PPKCQKLPPK PRIKPEGHLW RVKVTFGEEN IRFRMQKGWG  720
YNELVQETAK RFSLNDISGY QLRYLDDDSE WVLLTCDADV EECIDVYRSF KGGTIRLTLR  780
EPQVRVGSSL GSNALL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-143	Nin-like family protein