PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010489.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 234aa    MW: 25943.1 Da    PI: 10.7691
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010489.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.31.3e-18126214998
                            HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                     B3   9 dvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                             +++++ l++p +f ++  +    + +l+l + ++g+sW++k+ y++k++++++ +GW +F  +n+Lk gD+++F+l g+ +   l +
  Cse_sc010489.1_g060.1 126 KATSNKGLYVPSQFGTHLPKR---THQLKLHNrQKGKSWTIKVAYENKRKMHTFCGGWPKFMGDNELKYGDVCIFELLGKhEVSVLIL 210
                            4567778********555433...346999998999****************************************998767776677 PP

                            EEE- CS
                     B3  95 kvfr 98 
                            kv++
  Cse_sc010489.1_g060.1 211 KVRD 214
                            7666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MQKKRQTTTT PRARGRPKKL KGGGGRPKKI LAGSPAPAAA AAASEGLQLA LTNDPLITPL  60
NSIKHQSSGT AEVDPDYPGT AFKRYIPHGP PLDPIKDAFG RISSSDAIRI AWTYCTSWPN  120
FITVMKATSN KGLYVPSQFG THLPKRTHQL KLHNRQKGKS WTIKVAYENK RKMHTFCGGW  180
PKFMGDNELK YGDVCIFELL GKHEVSVLIL KVRDPSEAYI NELHSRLKKK GKLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.12e-10B3 family protein