PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010553.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 149aa    MW: 16720.6 Da    PI: 5.0354
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010553.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172875353
                    AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                           y+GV+ ++ +g++ AeI+d + ng  +r++lg+f+t+eeAa a+++a+ + 
  Cse_sc010553.1_g010.1 28 YRGVCARS-WGKYSAEIWDSTRNG--ARVWLGTFDTPEEAALAYDQAAFSA 75
                           9****888.**********44465..*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MFAESSSHDD LDLSSNRTTF SLSHKISYRG VCARSWGKYS AEIWDSTRNG ARVWLGTFDT  60
PEEAALAYDQ AAFSARVYGS LHAMDYKVEE GGSSDLTLKM SHSVRRIAIR EKKSKERRLD  120
DDSKNVVDVC VLDLGADYLE EILSLSEQV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105119RRIAIREKKSKERRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-34ERF family protein