PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010580.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 576aa MW: 64512 Da PI: 4.7838

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010580.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170	7.8e-53	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l+pGfrFhPtdeelv +yL++kv g++++l ++i+ vd+ykvePwdLp+ ++k+++ ewyfFs dkky +g+r+nrat++gyWk+t Cse_sc010580.1_g030.1 13 LAPGFRFHPTDEELVRYYLRRKVCGQPFRL-DAISVVDVYKVEPWDLPAlsRLKTRDLEWYFFSVLDKKYGNGSRTNRATEKGYWKTT 99 579*************************.99***********4458888888************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++v+ ++el+g+kktLv+++grapkge+t+Wvmheyrl Cse_sc010580.1_g030.1 100 GKDRTVYF-RSELTGMKKTLVYHSGRAPKGERTNWVMHEYRL 140 ****.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MALRIDSVSA SSLAPGFRFH PTDEELVRYY LRRKVCGQPF RLDAISVVDV YKVEPWDLPA 60 LSRLKTRDLE WYFFSVLDKK YGNGSRTNRA TEKGYWKTTG KDRTVYFRSE LTGMKKTLVY 120 HSGRAPKGER TNWVMHEYRL IDKELESAGV VQDAFVLCRI FHKSGSGPKN GEKYGAPLIE 180 EEWEEEEPIF VPKQEDFTEE LPFDMDSYLD ANDIAQIMHR DMPGQDGPRP LSFHQGDNIN 240 YADVSAAVTN DPQNSLVSVG EYSPKVDESD GSKSFGLPLQ TLLDPVSVDH GYIGESSNPT 300 NFDIDSLING SFFDAAGEFH DDSLYFQEDD LKNVVCPDSG FDMLEYFNQN IDNFQYSLDS 360 TGDKNIPPDS FLNLEVNFTD GTNQVSDASQ PFEGQNDFVA PYSKEEHPAQ QAGRKRGCQS 420 QETAIAHPFL KKASYMLGNV AAPPAFASEF PTKYMAAASQ ASSSGMIQFG NVSFNGGAVD 480 LSLGKHTHVN IVLSFALGQR EVNSFNLHQA GKVNSSASRG WFYCAFIWIL MLSLSFKIGS 540 LVSKLVSEDW GPDDHPMGST LKLVWTRYDK YVIKIV

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MALRIDSVSA SSLAPGFRFH PTDEELVRYY LRRKVCGQPF RLDAISVVDV YKVEPWDLPA  60
LSRLKTRDLE WYFFSVLDKK YGNGSRTNRA TEKGYWKTTG KDRTVYFRSE LTGMKKTLVY  120
HSGRAPKGER TNWVMHEYRL IDKELESAGV VQDAFVLCRI FHKSGSGPKN GEKYGAPLIE  180
EEWEEEEPIF VPKQEDFTEE LPFDMDSYLD ANDIAQIMHR DMPGQDGPRP LSFHQGDNIN  240
YADVSAAVTN DPQNSLVSVG EYSPKVDESD GSKSFGLPLQ TLLDPVSVDH GYIGESSNPT  300
NFDIDSLING SFFDAAGEFH DDSLYFQEDD LKNVVCPDSG FDMLEYFNQN IDNFQYSLDS  360
TGDKNIPPDS FLNLEVNFTD GTNQVSDASQ PFEGQNDFVA PYSKEEHPAQ QAGRKRGCQS  420
QETAIAHPFL KKASYMLGNV AAPPAFASEF PTKYMAAASQ ASSSGMIQFG NVSFNGGAVD  480
LSLGKHTHVN IVLSFALGQR EVNSFNLHQA GKVNSSASRG WFYCAFIWIL MLSLSFKIGS  540
LVSKLVSEDW GPDDHPMGST LKLVWTRYDK YVIKIV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-119	NAC family protein