PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010834.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 125aa    MW: 14328.1 Da    PI: 10.7712
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010834.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94e-0763117347
                            SS-HHHHHHHHHHHHHTTTT......-HHHHHHHHT....TTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGgg......tWktIartmg....kgRtlkqcksrwqky 47 
                            +WT+ E++ l+++v+++ ++       W++I           Rt+ ++k++w++ 
  Cse_sc010834.1_g020.1  63 PWTQSEEDTLKELVAKFVSDgntgrfPWSRILDLGAtifqSSRTPVDLKDKWRNM 117
                            8*****************99***********9877799999************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MDQDSGGEDG NDNKKGKREK KKVTGRDNDA AERSGDFQMR RRHHAFPVSP SLQVPERRRV  60
LVPWTQSEED TLKELVAKFV SDGNTGRFPW SRILDLGATI FQSSRTPVDL KDKWRNMQKA  120
SKKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17460.23e-08MYB_related family protein